Genetics Review

 

Welcome to the genetics review section and thank you for your interest! This section provides patients and family members with a basic explanation of some of the major concepts and terms used when discussing the genetics of neuromuscular diseases. Listed below are the concepts that this review covers.

  The human body is an amazing and complicated system. It is made up of billions of cells. The cell is the lowest common denominator of life because the information in cells is required to sustain life. Different cells specialize to perform particular functions. Together, groups of cells work together and form the tissues (such as brain tissue and muscle tissue) of the body and tissues are specialized and work together to form the organs, bones, and muscles of the body.
  Cells
Figure 1.
An example of groups of cells working together in a specific tissue type can be seen here. This is a photograph of muscle cells, which combine their efforts in muscle tissue to perform a common function: muscle contraction and relaxation. The green lines represent the muscle cell membrane (called the sarcolemma)and the bright purple-pink spots represent the nuclei in the muscle cells.

 

Genes

Figure 2.
We say that cells are the common denominator of life and that genes are the smallest, common units of inheritance. The genes contain long stretches of the genetic code, which gets copied so that this genetic code can be passed on to our children.

The genetic code is made up of four chemical bases that are arranged in many different ways in different genes. The chemical bases that make up the genes are represented by the letters A, T, C, and G. The genes are found on chromosomes in the cells of our body. Genes are important because they contain the recipes for making proteins. Therefore, researchers often say that "gene X codes for protein X."


Proteins
Proteins are very important in our bodies because they control the structure and most of the functions that our bodies can perform. The role of a protein depends on its shape and what other proteins and chemicals it interacts with. Some proteins build muscle, while other proteins help our blood to carry oxygen. There is a vast array of functions that different proteins perform. In addition, certain proteins may only be active and functioning in certain kinds of cells in our body. A muscle protein, for example, will not be expressed in a bone cell. Therefore, we can say that most proteins are expressed in specific cells at a specific point of ones lifetime and our genes code for all of this complex information.
Figure 3.


Dystrophin Associated Complex
Below in figure 4, a very important group of proteins affiliated with the muscle cell are shown. This group of proteins is called the Dystrophin Associated Protein Complex, or DAPC. Each protein that is named in the diagram is coded for by a different gene, and the different genes are found on different chromosomes. For example, the dystrophin gene is found on the X chromosome and codes for the dystrophin protein. An error in the dystrophin gene and therefore in the dystrophin protein leads to Duchenne or Becker muscular dystrophy. The gamma-sarcoglycan gene, located on chromosome 13, codes for the gamma sarcoglycan protein, and an error in the gene and protein may lead to a form of limb-girdle muscular dystrophy. Thus, errors in any of the genes that code for proteins associated with the DAPC may lead to a form of muscular dystrophy or a myopathy. If a person has an error in such a gene, which lies on a certain chromosome, and this chromosome is passed on to the person's child, a hereditary muscle disease may be present in the family.

Figure 4. The black line in the middle of this figure that is made up of circles represents the muscle cell membrane. The part of the figure below the membrane is the inside of the cell, while the part of the figure outside the membrane is the outside of the cell. Some muscle proteins are located right at the cell membrane, while others are located inside the cell.


Chromosomes

The genes lie along structures called chromosomes. Our chromosomes are tightly coiled, threadlike bundles of DNA s within cells that are visible with a microscope. Segments of DNA are broken down to form the genes. It is helpful to think of a string of pearls as the chromosome, with each bead representing one gene. It is estimated that every cell in a person's body contains 30,000 to 40,000 thousand genes that function to make us viable human beings.
Normally, every cell in the human body contains 46 chromosomes, or 23 pair of chromosomes. Each chromosome has a copy of a form of a particular gene, with a corresponding form of the same gene on the other chromosome. The gene on one chromosome is inherited from the father, and the corresponding gene on the partner chromosome is inherited from the mother. Therefore, there is a total of two copies of each and every gene. For example, the “hair color” gene may lie on chromosome 5. One chromosome 5 may have a gene that codes for red hair. The other chromosome 5 may have a gene that codes for blonde hair. The result of these two genes may be an individual with strawberry-blonde hair.

The picture in Figure 5 is called a karyotype. Chromosomes are numbered according to their size, beginning with the largest, chromosome 1. This is a female karyotype because the 23rd pair of chromosomes contains two X chromosomes. A male has one X and one Y chromosome.

Figure 5.


Mutations

Mutations can occur in our DNA. We can think of DNA as a tightly twisted ladder made up of letters (the genetic code, A,T,C,G) that form sentences (genes). These sentences give our bodies instructions on how to build proteins. If one of the letters or words in the sentence is incorrect, the sentence may no longer make sense, and therefore our bodies won't know what to do with that particular set of instructions. Consequently, a protein may be made incorrectly, or may not be made at all. Therefore, genetic mutations result in abnormal, shortened, or nonexistent proteins.

Genetic mutations can occur in two main ways:
Mutations can be inherited, or passed to a child from his mother or father.
Mutations can occur sporadically (by chance) in the DNA of an embryo.

Further, mutations can be inherited in different patterns.
• Autosomal Dominant
• Autosomal Recessive
• X-Linked

Autosomal Dominant

Autosomal dominant means that an individual needs to inherit only one copy of a gene with a mutation from either the mother or the father in order to develop a genetic disease. In autosomal dominant inheritance, we typically see several generations of affected individuals, both males and females will be affected in approximately equal proportions, and both a male and a female can pass on the mutation to a daughter or a son. (DIAGRAM of Pedigree and little people) This means that with each pregnancy, there is a 50% chance (or a 1 in 2 chance)that the baby will inherit the mutation for a given disorder.
For example, if A represents the healthy gene and a represents the gene with the genetic alteration, statistically, we would expect the following proportions of children to be affected or not affected with the given autosomal dominant disease.

The purple letters in Figure 6 represent the parent’s genes, and the black letters represent the genes of the potential offspring.
  A a
A AA Aa
A AA Aa
Figure 6.

As you can see, 50% of the children would inherit AA, and be healthy, while the other 50% would inherit Aa and have the given autosomal dominant disease.

Autosomal Recessive
Autosomal recessive inheritance is different from autosomal dominant inheritance in that an individuals needs to inherit two copies of a mutation in a gene, one from the mother and one from the father, in order to be affected with a genetic disorder. An example of an autosomal recessive disease is limb-girdle muscular dystrophy, a disease that causes weakness in the limbs and pelvic girdle of affected individuals. Limb-girdle muscular dystrophy (LGMD) is a group of diseases, a few of which are inherited in an autosomal dominant pattern. However, most forms of this disorder are autosomal recessive and therefore, an individual must inherit a mutation in the specific LGMD-causing gene from both his or her mother and his or her father to develop LGMD. With autosomal recessive inheritance, the parents of an affected child are called carriers. This means that they carry a mutation in a given gene, but this mutation does not affect the person clinically, and usually, the person doesn't know that he or she carries the gene. To have an affected child, two carriers would have to mate. Therefore, there would be a 25% risk with each pregnancy that the baby would be affected with the autosomal recessive disorder. We get this risk estimate by the fact that each parent can pass on either a chromosome with a "healthy gene" or their chromosome with the genetic mutation. 1/2 x 1/2 = 1/4 or 25%. In autosomal recessive inheritance, we may see that there is no other affected member in the family. However, both males and females are equally likely to pass on the gene with the mutation and both males and females can inherit the mutation.

For example, if A represents the healthy gene and a represents the gene with the genetic alteration, statistically, we would expect the following proportions of children to be affected or not affected with the given autosomal recessive disease. The purple letters represent the parent’s genes, and the black letters represent the genes of the potential offspring.

  A a
A AA Aa
a Aa aa
Figure 7.

As you can see in Figure 6, 50% of the children would inherit Aa, and be healthy, but would be carriers of the genes with the mutations. 25% would be AA and would have two healthy genes, while the remaining 25% would inherit aa and have the given autosomal recessive disease.

X-Linked
X-linked genetic diseases are a little more complicated to explain. There are two types of X-linked diseases: recessive and dominant.

To begin with, it is important to remember that females have two X chromosomes. One can be thought of as a "back up" copy. Males have only one X chromosome. Therefore, if a disease is X-linked recessive, a female who has one copy of the altered gene on one of her X chromosomes will not have the disease, but will be a carrier of the disease. The male, however, who has only one X, will have the disease. An affected male can then pass on this genetic mutation to his daughters, who will be carriers, but not to his sons (since he would pass on a Y to his sons). A female carrier has a 50% chance to pass on the altered gene and have a daughter who is a carrier, and a 50% chance to pass on the altered gene to a son, thus having an affected son. There is also a 50% chance that her son would be healthy and not carry the genetic mutation.

X-linked dominant diseases are much more rare than X-linked recessive diseases. In X-linked dominant diseases, an individual needs only to have one copy of the altered gene on the X chromosome to have the genetic disease. Thus a female can be affected even though she has the "back up" X chromosome, and there is a 50% chance that the genetic alteration will be passed on in each pregnancy and a 50% chance that the baby will be affected with the genetic disease. Every daughter that an affected father has will have the X-linked dominant disease, while every son the affected father has will not be affected (because the son will inherit the Y chromosome from his father).

Sporadic Mutations
Another way for an individual to develop a genetic disease is for a genetic mutation to occur by chance. This is what geneticists call a sporadic mutation. For example, using Duchenne muscular dystrophy (DMD), it is possible that a mother may carry a mutation in the gene that leads to DMD. The mother is very unlikely to be affected with DMD because she has a second X chromosome that compensates for the error in her other X chromosome. However, since males only have one X chromosome, they do not have a back up chromosome to compensate for such an error. Therefore, If a mother did carry an altered DMD gene, there would be a 50% chance that she would pass on the gene to each child. If one of her children was a female, there would be a 50% chance that the female baby would carry (and be unaffected) the altered gene, and a 50% chance that she would have inherited the unaltered, healthy gene. If this carrier mother had a son, there would be a 50% chance the son would carry the altered X chromosome and thus be affected, and a 50% chance that he didn't inherit the altered copy and would be healthy. However, in some cases, we know that a mother of an affected child does not carry an altered gene. In this case, we have learned that a random change in DNA can sometimes occur in a critical region of DNA, including a gene region that codes for an important protein. Sometime after the sperm fertilized the egg, an error occurred simply by chance in the new baby's DNA in the specific DMD gene. As a consequence, the baby has an altered DMD gene. New dominant and X-linked mutations are more likely to occur than autosomal recessive sporadic mutations, although a sporadic genetic alteration, in general, is a rare event.

It is important to understand that all people have occasional errors in their genes and DNA. In most cases, because we have a pair of genes, if one contains an error, the other can compensate and the person will have no medical problems. This is true for autosomal recessive conditions. In autosomal dominant and X-linked conditions, one error may be enough to cause illness, but this happens very rarely. Many of the changes produced because of mutations in genes are so mild that they go unnoticed. Also, our bodies have built-in DNA proofreading mechanisms that are capable of fixing many kinds of mutations in our DNA before the mutations cause problems. Importantly, one should never feel ashamed or guilty for having a child with a genetic condition. Such instances are left up to chance and are no ones fault. Scientific research has shown that about 3% of all children are born with some recognizable birth defect and probably all of us would be found to have some abnormal gene if we looked hard enough at our DNA.


Family Trees
In order to determine what type of inheritance pattern a particular genetic disorder follows, doctors and genetic counselors often construct a family tree. The scientific term for a family tree is a pedigree. Examples of pedigrees are shown above. A circle is used to represent a female and a square represents a male. A line going diagonally through the shape means the person has died. Healthcare professionals use different shading patterns to designate different medical conditions that a family member has. The shading patterns and their definitions can be found in the key that accompanies a pedigree.

To construct a pedigree, healthcare providers ask many types of questions, often about three generations of your family, including:
•Your ethnic background(s)
•How many siblings/aunts/uncles/cousins you have
•Ages of relatives
•Medical information on your family members, dating back 3 generations
•Is any one in the family related to each other by blood?
•Did any babies in the family have birth defects or medical problems
•Did any one in the family have miscarriages?
•A detailed medical history on the patient will be taken.

Figure 8: This family tree displays an autosomal dominant genetic disorder. We can determine this because there are several generations affected, both females and males are affected in equal proportions, and multiple family members have the disorder.


Figure 8.

All these questions help doctors and genetic counselors to determine whether a genetic disease could have been inherited from a particular side of the family and who else in the family may be at risk for the same genetic disorder. Below are links to some web sites that may be helpful in further explaining some genetic concepts:

Links
Basic Genetics
Biology Online
Dr. Chromo's School
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